Test: regenerate image manifest that use files customization

Regenerate image manifests which use the files customization and are
affected by the recent change to `osbuild/fsnode.go`, specifically to
always setting the `RemoveDestination` to `true`.

Signed-off-by: Tomáš Hozza <thozza@redhat.com>

test/data/manifests/centos_8-aarch64-edge_commit_customizations-boot.json

@@ -4791,19 +4791,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_8-aarch64-edge_container_customizations-boot.json

@@ -4791,19 +4791,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_8-aarch64-qcow2_customize-boot.json

@@ -5573,19 +5573,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_8-ppc64le-qcow2_customize-boot.json

@@ -5964,19 +5964,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_8-x86_64-edge_commit_customizations-boot.json

@@ -4951,19 +4951,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_8-x86_64-edge_container_customizations-boot.json

@@ -4951,19 +4951,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_8-x86_64-qcow2_customize-boot.json

@@ -5646,19 +5646,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-aarch64-edge_commit_customizations-boot.json

@@ -4647,19 +4647,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-aarch64-edge_container_customizations-boot.json

@@ -4647,19 +4647,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-aarch64-qcow2_customize-boot.json

@@ -4957,19 +4957,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-ppc64le-qcow2_customize-boot.json

@@ -5579,19 +5579,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-s390x-qcow2_customize-boot.json

@@ -5811,19 +5811,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-x86_64-edge_commit_customizations-boot.json

@@ -4855,19 +4855,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-x86_64-edge_container_customizations-boot.json

@@ -4855,19 +4855,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/centos_9-x86_64-qcow2_customize-boot.json

@@ -5326,19 +5326,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_36-aarch64-iot_commit_customizations-boot.json

@@ -5506,19 +5506,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_36-aarch64-iot_container_customizations-boot.json

@@ -5506,19 +5506,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_36-aarch64-qcow2_customize-boot.json

@@ -5418,19 +5418,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_36-x86_64-iot_commit_customizations-boot.json

@@ -5626,19 +5626,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_36-x86_64-iot_container_customizations-boot.json

@@ -5626,19 +5626,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_36-x86_64-qcow2_customize-boot.json

@@ -5563,19 +5563,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_37-aarch64-iot_commit_customizations-boot.json

@@ -5576,19 +5576,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_37-aarch64-iot_container_customizations-boot.json

@@ -5576,19 +5576,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_37-aarch64-qcow2_customize-boot.json

@@ -5416,19 +5416,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_37-x86_64-iot_commit_customizations-boot.json

@@ -5696,19 +5696,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_37-x86_64-iot_container_customizations-boot.json

@@ -5696,19 +5696,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_37-x86_64-qcow2_customize-boot.json

@@ -5529,19 +5529,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_38-aarch64-iot_commit_customizations-boot.json

@@ -5408,19 +5408,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_38-aarch64-iot_container_customizations-boot.json

@@ -5408,19 +5408,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_38-aarch64-qcow2_customize-boot.json

@@ -5424,19 +5424,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_38-x86_64-iot_commit_customizations-boot.json

@@ -5512,19 +5512,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_38-x86_64-iot_container_customizations-boot.json

@@ -5512,19 +5512,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/fedora_38-x86_64-qcow2_customize-boot.json

@@ -5529,19 +5529,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_7-x86_64-qcow2_customize-boot.json

@@ -2147,19 +2147,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-aarch64-edge_commit_customizations-boot.json

@@ -1955,19 +1955,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-aarch64-edge_container_customizations-boot.json

@@ -1955,19 +1955,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-aarch64-qcow2_customize-boot.json

@@ -2428,19 +2428,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-ppc64le-qcow2_customize-boot.json

@@ -2569,19 +2569,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-s390x-qcow2_customize-boot.json

@@ -2577,19 +2577,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-x86_64-edge_commit_customizations-boot.json

@@ -2025,19 +2025,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-x86_64-edge_container_customizations-boot.json

@@ -2015,19 +2015,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_8-x86_64-qcow2_customize-boot.json

@@ -2459,19 +2459,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-aarch64-edge_commit_customizations-boot.json

@@ -1976,19 +1976,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-aarch64-edge_container_customizations-boot.json

@@ -1976,19 +1976,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-aarch64-qcow2_customize-boot.json

@@ -2386,19 +2386,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-ppc64le-qcow2_customize-boot.json

@@ -2527,19 +2527,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-s390x-qcow2_customize-boot.json

@@ -2530,19 +2530,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-x86_64-edge_commit_customizations-boot.json

@@ -2046,19 +2046,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-x86_64-edge_container_customizations-boot.json

@@ -2036,19 +2036,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_84-x86_64-qcow2_customize-boot.json

@@ -2420,19 +2420,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-aarch64-edge_commit_customizations-boot.json

@@ -1925,19 +1925,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-aarch64-edge_container_customizations-boot.json

@@ -1925,19 +1925,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-aarch64-qcow2_customize-boot.json

@@ -2430,19 +2430,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-ppc64le-qcow2_customize-boot.json

@@ -2580,19 +2580,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-s390x-qcow2_customize-boot.json

@@ -2585,19 +2585,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-x86_64-edge_commit_customizations-boot.json

@@ -1995,19 +1995,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-x86_64-edge_container_customizations-boot.json

@@ -1985,19 +1985,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_85-x86_64-qcow2_customize-boot.json

@@ -2461,19 +2461,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-aarch64-edge_commit_customizations-boot.json

@@ -1949,19 +1949,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-aarch64-edge_container_customizations-boot.json

@@ -1949,19 +1949,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-aarch64-qcow2_customize-boot.json

@@ -2425,19 +2425,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-ppc64le-qcow2_customize-boot.json

@@ -2566,19 +2566,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-s390x-qcow2_customize-boot.json

@@ -2565,19 +2565,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-x86_64-edge_commit_customizations-boot.json

@@ -2019,19 +2019,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-x86_64-edge_container_customizations-boot.json

@@ -2009,19 +2009,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_86-x86_64-qcow2_customize-boot.json

@@ -2456,19 +2456,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-aarch64-edge_commit_customizations-boot.json

@@ -1955,19 +1955,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-aarch64-edge_container_customizations-boot.json

@@ -1955,19 +1955,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-aarch64-qcow2_customize-boot.json

@@ -2428,19 +2428,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-ppc64le-qcow2_customize-boot.json

@@ -2569,19 +2569,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-s390x-qcow2_customize-boot.json

@@ -2577,19 +2577,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-x86_64-edge_commit_customizations-boot.json

@@ -2025,19 +2025,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-x86_64-edge_container_customizations-boot.json

@@ -2015,19 +2015,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_87-x86_64-qcow2_customize-boot.json

@@ -2459,19 +2459,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-aarch64-edge_commit_customizations-boot.json

@@ -1955,19 +1955,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-aarch64-edge_container_customizations-boot.json

@@ -1955,19 +1955,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-aarch64-qcow2_customize-boot.json

@@ -2428,19 +2428,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-ppc64le-qcow2_customize-boot.json

@@ -2569,19 +2569,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-s390x-qcow2_customize-boot.json

@@ -2577,19 +2577,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-x86_64-edge_commit_customizations-boot.json

@@ -2025,19 +2025,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-x86_64-edge_container_customizations-boot.json

@@ -2015,19 +2015,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_88-x86_64-qcow2_customize-boot.json

@@ -2459,19 +2459,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-aarch64-edge_commit_customizations-boot.json

@@ -4703,19 +4703,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-aarch64-edge_container_customizations-boot.json

@@ -4703,19 +4703,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-aarch64-qcow2_customize-boot.json

@@ -5154,19 +5154,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-ppc64le-qcow2_customize-boot.json

@@ -5752,19 +5752,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-s390x-qcow2_customize-boot.json

@@ -5984,19 +5984,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-x86_64-edge_commit_customizations-boot.json

@@ -4914,19 +4914,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-x86_64-edge_container_customizations-boot.json

@@ -4903,19 +4903,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_9-x86_64-qcow2_customize-boot.json

@@ -5491,19 +5491,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-aarch64-edge_commit_customizations-boot.json

@@ -1841,19 +1841,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-aarch64-edge_container_customizations-boot.json

@@ -1841,19 +1841,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-aarch64-qcow2_customize-boot.json

@@ -2184,19 +2184,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-ppc64le-qcow2_customize-boot.json

@@ -2405,19 +2405,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-s390x-qcow2_customize-boot.json

@@ -2478,19 +2478,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-x86_64-edge_commit_customizations-boot.json

@@ -1929,19 +1929,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-x86_64-edge_container_customizations-boot.json

@@ -1919,19 +1919,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_90-x86_64-qcow2_customize-boot.json

@@ -2317,19 +2317,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_91-aarch64-edge_commit_customizations-boot.json

@@ -4703,19 +4703,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }

test/data/manifests/rhel_91-aarch64-edge_container_customizations-boot.json

@@ -4703,19 +4703,23 @@
               "paths": [
                 {
                   "from": "input://file-246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e/sha256:246c90eeaabd45d57f9c52ba19ec83577e1ece72cfb262b674dcd444f8f33a8e",
-                  "to": "tree:///etc/systemd/system/custom.service"
+                  "to": "tree:///etc/systemd/system/custom.service",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2/sha256:3858d66c9da0509af1f75847bf49134bf8df01bd712b59ce251826744d3bafe2",
-                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf"
+                  "to": "tree:///etc/systemd/system/custom.service.d/override.conf",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258/sha256:a08a06016ca077755a7948a9631271011f1a1c3ecaa0e701e10ec0bec1923258",
-                  "to": "tree:///etc/custom_file.txt"
+                  "to": "tree:///etc/custom_file.txt",
+                  "remove_destination": true
                 },
                 {
                   "from": "input://file-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855/sha256:e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855",
-                  "to": "tree:///etc/empty_file.txt"
+                  "to": "tree:///etc/empty_file.txt",
+                  "remove_destination": true
                 }
               ]
             }